Welcome to pinside! sorry to hear about the issues your having.
Starting a thread is a great start. I would also post a note (with a link to this thread) over in the TZ owners thread here:
https://pinside.com/pinball/forum/topic/twilight-zone-owners-club
For the J133 issue, I would just follow the wires and see if something is loose/shorted/etc. You can search J133 in the manual to see the schematic: https://www.ipdb.org/files/2684/Bally_1993_Twilight_Zone_Operations_Manual_OCR_searchable.pdf
For the flippers being stuck up, does it happen as soon as you power up the machine? Makes me think transistor, but others who are more knowledgeable than myself will chime in I'm sure. Link to another thread with similar issues: https://pinside.com/pinball/forum/topic/helpflipper-stuck-up