Yes, I see them now. We have looked at your photos carefully. In the light of all other holes lining up well, and all inserts aligning with nowhere near the error we see in the roll over slots and other cut out... we can say fairly confidently that you are an unlucky owner of a playfield that is different. Literally the first one of this title we have seen out of around 100 units sold for this one so far. I also am comparing the print to cut "visual" (best I can do remotely) and can tell you that the standard template we match each unit to before shipping looks exactly like what you got.
If the cuts or art was off... much more all around would be misaligned.
I say that you are going to have to clearance these where necessary using a Dremel.
I wish I could tell you that you got a bad one... but the evidence points otherwise at this point.
We have dealt with similar issues (with less deviation) with at least 3 other titles so far. They just had no reason to make each game identical... and I know direct from the source that they used 2-3 vendors at times for parts like playfields on the same title.
I will study it some more... but I think you got an accurate product to what we created.