90% of time it is the score reels doing this. Take each reel out and clean contacts on the zero switches. Sometimes just pressing on switches at reel will stop the score motor.
I had an old Williams where the score motor armature was stuck causing the motor to overrun the home position. Now I always put a drop of oil on SM armature when I get an new machine. Putting strip of paper in Motor Run, contact top of index stack will verify.
Here is picture:
Armature in (resized).pngArmature out (resized).png