So the primary shot coil stopped working (this was replaced maybe 2 years ago) it would try to shoot the ball weakly then it wouldn't try at all. This happened in a span of 5 minutes (was previously working fine). THen I noticed all the coils in that line weren't working either, right flipper, left flipper, VUK, Ripper whole and so on. Cabling looked ok, and all fused tested fine (in circuit) I noticed that the CN1 connector was a little toasty so I pulled it and one of the pins from the PS board came off with the molex. Reflowed the pin and its in there pretty strong now. Doesn't seem to of fixed the issue. Any thoughts?

Yeah all fuses out of circuit tested good as well. Yeah I believe they are 50V related from what I was reading up on. Just not sure what I should be looking at or what to test.

Yeah I checked the F5 again just to be sure, pulled it and it tested good. THen I tested it in the fuse holder on the PPB too and it is good. I looked at the wiring and some of those coils do share a yellow violet wire but the flippers do not. looked at all the daisy chained wires and they seemed ok, did some tone testing with them. Not sure what else to test.

will take another look at that trace and test that 50V AC on J4 tonight! Thanks guy!

Ok I figured it out. First I want to thank everyone for helping me with this and apologies for being a newb with terminology. Still have some questions for myself and any people researching similar issues in the future. My issue was with the F5 fuse which I think may of been taken out by that bad solder joint on CN1 pin. I discovered this when testing the PPB J4 connector. When I was testing this I wasn't getting good voltage but when testing it I noticed the J5 fuse underneath the wires for that connector which I hadn't noticed before. When F5 fuse was mentioned earlier, I was testing F5 on the main power supply which is different than the PPB (Playfield Power Board). Now I know the difference. I've attached some pics and questions below. (PIC1 and PIC2)

Here is a pic of the burnt pin on CN1 that lift out when I removed the connector, I have since resoldered and reflowed all the connector pins. (PIC 3 and PIC4)

Now I noticed on the main power supply a bulge is present on the back of the PCB. Just looked a little suspect, none of the caps are exploding and I don't think even if they did, they would cause a bulge like this on the back of the PCB. It is only noticeable on the back. Is this normal? Should I replace it? Was looking at a Rottendog replacement, does anyone recommended or not recommend them? (PIC5)

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Yeah I was thinking that too about the foil bulge however that bulge is actually really hard like there is something under it. Great tips about the connector I tried cleaning the burnt pin with a qtip and 99% alcohol which helped some but it is still bit dark so I will most likely replace it. So far the fuse has held so I think I am good. Thanks everyone!