Phase two complete!
Frankly, I found this modification much more gratifying than the larger speakers. The 5.25" speakers definitely improved the sound, and it also gives me the same volume and better detail to the sound at lower volume settings. But the subwoofer was easier and added a lot more dimension to the sound. I've seen posts from people asking about adding a shaker motor. Having seen what the subwoofer does, I think a shaker motor would be pointless. In addition to the benefit to the music, the machine has lots of sound effects with plenty of bass, and the subwoofer gives you a deep shake on those that I think a motor never could.
Certainly if I were choosing between the two, I'd definitely go subwoofer first. I guess if after that a person still wanted to add the shaker motor, I wouldn't fault them for that, but I'm sure that for me personally, I don't need it.
This upgrade was a lot easier than phase one, but more expensive since it involves the subwoofer. As with phase one, I went DIY on the connector as much as possible. The retail option for a connector to pull the line-out signal from C5 on the motherboard isn't very expensive itself, so there's hardly any money to be saved this way. But it's more fun.
Here's what the hookup looks like:
whole board and subwoofer cable
close up of C5 and line-out connector adapter
One thing I do like about this from a practical approach is that it lets me use the standard RCA jacks for the line level signal. The third-party retail option appears to have a 1/8" phono jack for the three channels (one stereo jack for the L+R, and a mono jack for subwoofer). Again, it's not going to break the bank to add an adapter to convert to RCA, but why complicate things when it's easy enough to make up a standard connector.
I didn't take many photos of assembly. There's already a fair amount of discussion of the general concept in a different thread, and that's even referenced by a pinned post on this thread. Suffice to say, the key elements are to combine the negative conductors on the left and right channels before crimping the Molex pin for that ground, and to use pins 1 and 7 on the Molex connector for the subwoofer.
Here's a photo of me soldering the negative conductors from the left and right channels before doing the heat-shrink tubing and crimping:
soldering the negatives
And here's the finished adapter with all three RCA jacks:
completed C5 adapter
As noted in @pinmonk's thread, crimping is a delicate operation because the pins are so small. But it's doable even without Molex's expensive tools. Just take your time, use small-jawed pliers such as needle-nose or electrical pliers, make sure you only ever bend the crimping tabs and not any other part of the connector, and do it one tab at a time, folding it over and crimping it down before doing the other side of the connector.
As with the negative conductors, I put just a dab of solder on the crimped connection too, just to ensure a solid connection. If you do that, make sure you don't overdo it, otherwise the solder will make the connector too big to fit in the housing. If there is solder on the outside of the crimp, it's too much.
With the adapter made up, hooking up the subwoofer is as simple as plugging the adapter onto the C5 connector on the motherboard, and then plugging the subwoofer's cable onto the subwoofer connector on the adapter. I haven't done phase three yet -- adding a discrete amp instead of using the one on the pin's motherboard -- so the left and right channel connectors are left unused for now.
As can be seen in the photos, I took out the topper plug at the top of the backbox and ran the subwoofer cable through that for now. I guess eventually I will probably take a Forstner bit to the bottom of the cabinet and run the cable through that hole.
Here are the parts I used with links to the Digi-key and Monoprice product pages where I got them:
1x Molex 10112073 connector housing
5x Molex 8550129 connector socket (gold-plated)
1x Single-channel RCA cable (this can be any RCA cable as long as it has the female connector on one end...the other end doesn't matter because it'll be cut off)
1x Two-channel RCA cable (again, just need the RCA jacks on one end)
I looked at buying the RCA jacks individually, but it turns out it's way less expensive to just buy a pre-made cable and hack it up. I'm not really a big fan of cutting up perfectly good parts, but in this case it just seemed like the best way to go. If someone knows of a good place to buy the RCA jacks on their own at a reasonable price (say, $0.50 to $1.00 at the most), I'd love to know about it.