Like HowardR said, the schematic will tell you how to position the switch dogs (S = Short, L = Long) that ride along the cam edges on the A and C levels.
Your switch stacks probably went back on the way they were before because the harness has “muscle memory,” but you can intuitively verify if you have them correct.
Make sure the score motor is turned to the home position. The switch dog on 1C should be in the cam trough, and the switch closest to the cam should be open.
Now, fixate on the switch stacks that concern you the most, the ones that mount on the front and back of a bracket. Turn the score motor slowly until one of the actuating rods pushes the switches. All switches should change state. Closed switches should open with a noticeable gap. Open switches should close, and close snugly. Make-break switches should make-break. This action should look clean and obvious. If all switches do not change state, or if they seem to bend too much, find the correct way to re-mount the switch.
This exercise is valuable for all of the switch stacks. Other things can go wrong when you take all the stacks off and put them back on again. Switch dog positions and the front-back-mounted switches are one thing, but you also have to be mindful that all the switches are straight and do not touch things above or below them. There is precious little clearance. If things are touching, loosen the screws and straighten the switches. I use a magnifying eyewear headset and strong light to really inspect things.
This annotated score motor diagram explains how to understand the numbers and letters. It’s from a different Gottlieb game, but the ABCs still apply to your Surf Champ. Refer to your schematic to see what your switches are supposed to do.
Score Motor Switches (resized).png