I figured it out last night. I installed a new fuse, unplugged all of the connectors on the MPU board and powered up the game, the fuse didn't blow and I was getting the correct voltage at TP3 on the SDB. I then turned the game off, installed a connector on the MPU board, turned on the game, the fuse didn't blow. I did this until I got down to J4, plugged it in, turned on the game and the fuse below within a few seconds.
I pulled the MPU board. I did some continuity testing on the pins to make sure there wern't any solder bridges. I was getting ground on all 4 of the bottom pins which didn't seem right to how the trace routing looked on the board so I checked these pins on my Eight Ball Deluxe and only the bottom two pins had ground.
As it turns out, we fixed a few things on the MPU board and added a ground mod earlier in the day. The ground mod jumper wire insulation melted ever so slightly during install and was making contact with a leg of a resistor shorting it out causing my problem. I removed the ground mod wire, re-installed the mpu, and it booted right up! Next will be replacing all of the nasty looking pins on the bridge rectifier board.