Quoted from G-P-E:You can find the color codes within the Dolly Parton manual, sheet 45.
If you don't have the manual - you can either buy one (Pinball Resource?) or download a soft copy from ipdb.org
Yes, the wiring on yours looks pretty buggered. First wire is see on your board is the wire at pin 1 -- white or color "50". Dolly Parton manual says this goes to pin 3. But pin 3 already has a gray/blue (92) wire installed... No doubt the opposite end of these wires are going to the wrong places as well.
Incidentally, Pin 1 of J3... I cannot find anything in the schematics of the solenoid driver board that uses pin 1.
Only easy wire to spot is the missing (damaged) pin 10 should be the white/brown wire that is jumpered to the capacitor lead on your board.
No easy fix, you will need to go through all of your wiring *at both ends* and untangle this mess.
Thanks Ed! I found it, I'd say I can't believe I missed it but I'm not surprised I missed it, there's a lot in the schematics that I'm getting used to. It looks like I'm going to be spending some time this weekend and next sorting out the wires. I'm hoping that the other end of those wires go back to their original/proper location and whoever repined J3 just messed up the connector and nothing else. I'll be ordering those parts you mentioned above as well as some new caps for the solenoid board this evening.