Yeah, you can't test AC like that, as you need to go ACROSS the transformer secondary coil. From the WPC manual you can see that here. Putting a probe on pin 1 with meter set to AC, put the other probe on pin 3,6,9, or 5 (they are all tied to the common point on the other side of the transformer winding) you should see a measurement of your transformer secondary AC. Make some sense?
The diagram below gives an idea, its from the WPC schematics manual, but appears a little different that your transformer setup.