Herg can confirm, but I believe when you order from his site, you can specify WPC89 or 95, and he will set the board up with the appropriate settings for your game
But if you need to change something, hooking up the cable and opening the software takes about 9 seconds. I see you have a Mac though, from your post it doesn’t sound like you are going to be into running a Windows emulator.
Anyway, You really shouldn’t need to change anything at all for the board to work perfectly well - it can help to make some minute changes and make the game better but it should work fine out of the box.
I’d double check your connections, sounds like you may have a connector or wire that’s off, or (less likely) a bad board. Even if hooked up and your board is set up for a WPC95 game at least 3 of the light strings should come on. If you’ve got none, it’s something else